feat(eda): rasterizar join graph a Figure matplotlib real en el capitulo de relaciones
draw_join_graph_figure (datascience, grupo eda): dibuja el join graph de la base como una matplotlib Figure real (networkx spring_layout seed=42, nodos = tablas, hubs destacados, flechas dirigidas con etiqueta from_col->to_col + cardinalidad). Nunca lanza: devuelve una Figure de error si algo falla; entrada vacia -> Figure 'Sin relaciones FK detectadas'. render_automatic_eda_folder ahora inserta esa Figure (bloque Figure lazy via make) en el capitulo de relaciones cuando hay edges, ademas del texto Mermaid (util para el MD/LLM). Antes solo se volcaba el texto del grafo; ahora el PDF/PPTX muestran el diagrama dibujado. Tests nuevos: la Figure real se construye con edges y se omite sin edges. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
This commit is contained in:
@@ -72,8 +72,10 @@ from .profile_datetime import profile_datetime
|
||||
from .resample_timeseries import resample_timeseries
|
||||
from .add_pdf_internal_links import add_pdf_internal_links
|
||||
from .suggest_intratable_fk_candidates import suggest_intratable_fk_candidates
|
||||
from .draw_join_graph_figure import draw_join_graph_figure
|
||||
|
||||
__all__ = [
|
||||
"draw_join_graph_figure",
|
||||
"suggest_intratable_fk_candidates",
|
||||
"detect_time_column",
|
||||
"extract_timeseries_raw",
|
||||
|
||||
@@ -0,0 +1,103 @@
|
||||
---
|
||||
id: draw_join_graph_figure_py_datascience
|
||||
name: draw_join_graph_figure
|
||||
kind: function
|
||||
lang: py
|
||||
domain: datascience
|
||||
version: "1.0.0"
|
||||
purity: impure
|
||||
signature: "def draw_join_graph_figure(join_graph: dict, title: str = None) -> \"matplotlib.figure.Figure\""
|
||||
description: "Rasteriza el join graph de una base (relaciones FK inter-tabla, salida de build_join_graph) a un matplotlib.figure.Figure: nodos circulares con el nombre de cada tabla (hubs en color de acento cálido, el resto neutro) y aristas dirigidas etiquetadas from_col→to_col (más la cardinalidad si viene). Es la contrapartida dibujada del string Mermaid para que el capítulo de relaciones del informe AutomaticEDA muestre un diagrama real. Layout networkx spring_layout determinista (seed=42), backend Agg sin abrir ventanas; defensivo: nunca lanza y nunca hace I/O."
|
||||
tags: [eda, plot, relations, graph, matplotlib, figure, networkx, datascience, impure]
|
||||
uses_functions: []
|
||||
uses_types: []
|
||||
returns: []
|
||||
returns_optional: false
|
||||
error_type: "error_go_core"
|
||||
imports: [matplotlib, networkx]
|
||||
example: |
|
||||
from draw_join_graph_figure import draw_join_graph_figure
|
||||
join_graph = {
|
||||
"nodes": [
|
||||
{"table": "customers", "out_degree": 0, "in_degree": 1, "role": "dimension"},
|
||||
{"table": "orders", "out_degree": 1, "in_degree": 0, "role": "fact"},
|
||||
],
|
||||
"edges": [
|
||||
{"from_table": "orders", "from_col": "customer_id",
|
||||
"to_table": "customers", "to_col": "id", "cardinality": "N:1"},
|
||||
],
|
||||
"hubs": ["orders"],
|
||||
}
|
||||
fig = draw_join_graph_figure(join_graph, title="Relaciones FK")
|
||||
fig.savefig("/tmp/join_graph.png")
|
||||
tested: true
|
||||
tests:
|
||||
- "test_returns_figure_with_axis"
|
||||
- "test_savefig_produces_nonempty_png"
|
||||
- "test_empty_dict_does_not_raise_and_savefig_png"
|
||||
- "test_none_does_not_raise_and_savefig_png"
|
||||
test_file_path: "python/functions/datascience/draw_join_graph_figure_test.py"
|
||||
file_path: "python/functions/datascience/draw_join_graph_figure.py"
|
||||
params:
|
||||
- name: join_graph
|
||||
desc: "Dict producido por build_join_graph. Claves: `nodes` (list[dict] con table, out_degree, in_degree, role), `edges` (list[dict] con from_table, from_col, to_table, to_col y opcional cardinality/inclusion) y `hubs` (list[str] de tablas hub a destacar en color cálido). Claves ausentes, items no-dict, None o {} se toleran (devuelve Figure con texto, sin lanzar). Los nombres de nodo se derivan también de las aristas, así que un grafo con edges pero sin nodes explícitos igual se dibuja."
|
||||
- name: title
|
||||
desc: "Título dibujado sobre el diagrama. Si se omite (None) se usa \"Join graph\". Default None."
|
||||
output: "Un matplotlib.figure.Figure (figsize 7x5) con un único Axes que contiene el diagrama node-link dirigido: tablas como nodos circulares etiquetados (hubs en acento cálido #DD8452, resto en azul neutro #4C72B0) y FKs como flechas dirigidas con etiqueta from_col→to_col (+ cardinalidad). Si join_graph no tiene nodos ni aristas (o es None/{}), devuelve igualmente una Figure con el texto centrado \"Sin relaciones FK detectadas.\"; ante cualquier fallo interno devuelve una Figure con un mensaje genérico (nunca lanza). El caller rasteriza/cierra la figura; la función no la muestra ni la guarda."
|
||||
---
|
||||
|
||||
## Ejemplo
|
||||
|
||||
```python
|
||||
from draw_join_graph_figure import draw_join_graph_figure
|
||||
|
||||
# `join_graph` es la salida de build_join_graph (nodes + edges + hubs).
|
||||
join_graph = {
|
||||
"nodes": [
|
||||
{"table": "customers", "out_degree": 0, "in_degree": 1, "role": "dimension"},
|
||||
{"table": "orders", "out_degree": 2, "in_degree": 0, "role": "fact"},
|
||||
{"table": "products", "out_degree": 0, "in_degree": 1, "role": "dimension"},
|
||||
],
|
||||
"edges": [
|
||||
{"from_table": "orders", "from_col": "customer_id",
|
||||
"to_table": "customers", "to_col": "id", "cardinality": "N:1"},
|
||||
{"from_table": "orders", "from_col": "product_id",
|
||||
"to_table": "products", "to_col": "id", "cardinality": "N:1"},
|
||||
],
|
||||
"hubs": ["orders"], # `orders` se pinta en color de acento (tabla de hechos)
|
||||
}
|
||||
|
||||
fig = draw_join_graph_figure(join_graph, title="Relaciones FK")
|
||||
|
||||
# El renderer del informe lo rasteriza; aquí solo persistimos para inspección.
|
||||
fig.savefig("/tmp/join_graph.png")
|
||||
```
|
||||
|
||||
## Cuando usarla
|
||||
|
||||
Úsala en el capítulo de relaciones de un informe AutomaticEDA cuando quieras un
|
||||
diagrama **dibujado** del esquema relacional, no solo el bloque Mermaid pegable.
|
||||
Pásale directamente la salida de `build_join_graph` (`nodes` + `edges` + `hubs`)
|
||||
y obtienes una `matplotlib.figure.Figure` lista para que el renderer perezoso la
|
||||
rasterice. Es la pareja visual del string Mermaid: Mermaid sirve para pegar en
|
||||
Markdown/docs que lo soporten; esta función produce la imagen real (PNG/PDF) que
|
||||
va embebida en informes que no renderizan Mermaid.
|
||||
|
||||
## Gotchas
|
||||
|
||||
- **Impura por matplotlib.** Fija el backend `Agg` al importar — no abre
|
||||
ventanas ni depende de un display. Segura de llamar en lotes desde el
|
||||
renderer.
|
||||
- **Layout determinista (`seed=42`).** Usa `nx.spring_layout(G, seed=42)`, así
|
||||
que la misma entrada produce el mismo diagrama (test reproducible). Para
|
||||
grafos de 0/1 nodos usa una posición fija centrada en vez del spring layout.
|
||||
- **No hace I/O.** No llama `plt.show()` ni guarda a disco — solo devuelve la
|
||||
`Figure`. Quien la consume la rasteriza y la libera (`plt.close(fig)`) para no
|
||||
acumular memoria en informes con muchas tablas.
|
||||
- **Devuelve una Figure, NO un dict.** A diferencia de `build_join_graph` (que
|
||||
devuelve el dict del grafo), esta función devuelve el objeto de figura ya
|
||||
dibujado.
|
||||
- **Defensiva, nunca lanza.** `None`, `{}`, claves ausentes o items malformados
|
||||
se manejan sin error: en el peor caso devuelve una `Figure` con
|
||||
"Sin relaciones FK detectadas." (vacío) o un mensaje genérico (fallo interno).
|
||||
No la envuelvas en try/except por miedo a un raise — no lo hay.
|
||||
@@ -0,0 +1,214 @@
|
||||
"""Impure EDA helper: rasterize a join graph to a matplotlib Figure (`eda` group).
|
||||
|
||||
Takes the join graph produced by ``build_join_graph`` (inter-table FK relations)
|
||||
and draws it as a directed node-link diagram on a ready-to-rasterize
|
||||
``matplotlib.figure.Figure``. Hub tables (the ones with the highest out-degree,
|
||||
candidate fact tables of a star schema) are highlighted in a warm accent colour;
|
||||
the rest use a neutral colour. Directed edges carry a ``from_col→to_col`` label
|
||||
(plus the cardinality when present).
|
||||
|
||||
This is the *drawn* counterpart of the Mermaid string that ``build_join_graph``
|
||||
also emits: the relations chapter of an AutomaticEDA report can show a real
|
||||
picture instead of only the pasteable Mermaid block.
|
||||
|
||||
Impure because it touches matplotlib's rendering machinery. It pins the headless
|
||||
Agg backend and a deterministic ``spring_layout`` seed so the output is
|
||||
reproducible. It never raises: on any internal failure (or empty input) it
|
||||
returns a ``Figure`` carrying a centered message, so the lazy render of the
|
||||
document is never broken.
|
||||
"""
|
||||
|
||||
import matplotlib
|
||||
|
||||
matplotlib.use("Agg")
|
||||
|
||||
import matplotlib.pyplot as plt # noqa: E402
|
||||
import networkx as nx # noqa: E402
|
||||
|
||||
# Warm accent reserved for hub tables (candidate fact tables / star-schema cores).
|
||||
_HUB_COLOR = "#DD8452"
|
||||
# Neutral blue for every other table.
|
||||
_NODE_COLOR = "#4C72B0"
|
||||
# Muted gray for the empty/error message text.
|
||||
_MUTED_TEXT = "#5f6b7a"
|
||||
# Edge colour and label colour.
|
||||
_EDGE_COLOR = "#7a7a7a"
|
||||
_EDGE_LABEL_COLOR = "#34495e"
|
||||
# Constant node size; shared with the edge drawing so arrowheads stop at the
|
||||
# node boundary instead of being hidden under the marker.
|
||||
_NODE_SIZE = 2200
|
||||
|
||||
|
||||
def _text_figure(message: str) -> "matplotlib.figure.Figure":
|
||||
"""Return a blank Figure carrying a single centered message.
|
||||
|
||||
Used both for the "no relations" case and as the never-raise fallback.
|
||||
"""
|
||||
fig, ax = plt.subplots(figsize=(7, 5))
|
||||
ax.axis("off")
|
||||
ax.text(
|
||||
0.5,
|
||||
0.5,
|
||||
message,
|
||||
ha="center",
|
||||
va="center",
|
||||
fontsize=12,
|
||||
color=_MUTED_TEXT,
|
||||
transform=ax.transAxes,
|
||||
)
|
||||
fig.tight_layout()
|
||||
return fig
|
||||
|
||||
|
||||
def _edge_label(edge: dict) -> str:
|
||||
"""Build the ``from_col→to_col`` label of an edge, appending cardinality."""
|
||||
fc = edge.get("from_col")
|
||||
tc = edge.get("to_col")
|
||||
if fc is not None and tc is not None:
|
||||
label = f"{fc}→{tc}"
|
||||
elif fc is not None:
|
||||
label = str(fc)
|
||||
elif tc is not None:
|
||||
label = str(tc)
|
||||
else:
|
||||
label = ""
|
||||
card = edge.get("cardinality")
|
||||
if card:
|
||||
label = f"{label} ({card})" if label else str(card)
|
||||
return label
|
||||
|
||||
|
||||
def draw_join_graph_figure(join_graph: dict, title: str = None):
|
||||
"""Rasterize a join graph to a matplotlib Figure.
|
||||
|
||||
Builds a ``networkx.DiGraph`` from the graph's nodes and edges, lays it out
|
||||
with a deterministic ``spring_layout`` (``seed=42``) and draws it on a
|
||||
``matplotlib.figure.Figure``: tables as labelled circular nodes (hubs in a
|
||||
warm accent, the rest neutral) and FK relations as directed arrows labelled
|
||||
``from_col→to_col`` (plus cardinality when available).
|
||||
|
||||
The function never raises. On empty/``None`` input it returns a Figure with
|
||||
a centered "Sin relaciones FK detectadas." message; on any internal failure
|
||||
it returns a Figure with a generic centered message. It never shows the
|
||||
figure nor writes it to disk — the document renderer rasterizes it.
|
||||
|
||||
Args:
|
||||
join_graph: Dict produced by ``build_join_graph`` with keys ``nodes``
|
||||
(list of ``{table, out_degree, in_degree, role}``), ``edges`` (list
|
||||
of ``{from_table, from_col, to_table, to_col, cardinality?,
|
||||
inclusion?}``) and ``hubs`` (list of hub table names to highlight).
|
||||
Missing keys, non-dict items, ``None`` or ``{}`` are all tolerated.
|
||||
title: Optional title drawn above the diagram. When omitted, the title
|
||||
defaults to "Join graph".
|
||||
|
||||
Returns:
|
||||
A ``matplotlib.figure.Figure`` (figsize 7x5) with a single Axes holding
|
||||
the node-link diagram. The caller rasterizes/closes it.
|
||||
"""
|
||||
try:
|
||||
jg = join_graph if isinstance(join_graph, dict) else {}
|
||||
nodes = jg.get("nodes") or []
|
||||
edges = jg.get("edges") or []
|
||||
hubs = {h for h in (jg.get("hubs") or []) if h is not None}
|
||||
|
||||
# Collect node names from the declared nodes and, defensively, from the
|
||||
# edges (so a graph with edges but no explicit nodes still draws).
|
||||
node_names: list = []
|
||||
seen: set = set()
|
||||
|
||||
def _register(name) -> None:
|
||||
if name is not None and name not in seen:
|
||||
seen.add(name)
|
||||
node_names.append(name)
|
||||
|
||||
for n in nodes:
|
||||
if isinstance(n, dict):
|
||||
_register(n.get("table"))
|
||||
for e in edges:
|
||||
if isinstance(e, dict):
|
||||
_register(e.get("from_table"))
|
||||
_register(e.get("to_table"))
|
||||
|
||||
if not node_names:
|
||||
return _text_figure("Sin relaciones FK detectadas.")
|
||||
|
||||
graph = nx.DiGraph()
|
||||
for name in node_names:
|
||||
graph.add_node(name)
|
||||
|
||||
edge_labels: dict = {}
|
||||
for e in edges:
|
||||
if not isinstance(e, dict):
|
||||
continue
|
||||
ft = e.get("from_table")
|
||||
tt = e.get("to_table")
|
||||
if ft is None or tt is None:
|
||||
continue
|
||||
graph.add_edge(ft, tt)
|
||||
edge_labels[(ft, tt)] = _edge_label(e)
|
||||
|
||||
fig, ax = plt.subplots(figsize=(7, 5))
|
||||
|
||||
# Deterministic layout. Fixed positions for trivial graphs so a single
|
||||
# node sits centered instead of at an arbitrary spring-layout point.
|
||||
if graph.number_of_nodes() <= 1:
|
||||
pos = {name: (0.5, 0.5) for name in graph.nodes()}
|
||||
else:
|
||||
pos = nx.spring_layout(graph, seed=42)
|
||||
|
||||
node_colors = [
|
||||
_HUB_COLOR if name in hubs else _NODE_COLOR for name in graph.nodes()
|
||||
]
|
||||
nx.draw_networkx_nodes(
|
||||
graph,
|
||||
pos,
|
||||
ax=ax,
|
||||
node_color=node_colors,
|
||||
node_size=_NODE_SIZE,
|
||||
node_shape="o",
|
||||
edgecolors="white",
|
||||
linewidths=1.5,
|
||||
)
|
||||
nx.draw_networkx_labels(
|
||||
graph,
|
||||
pos,
|
||||
ax=ax,
|
||||
font_size=9,
|
||||
font_color="white",
|
||||
font_weight="bold",
|
||||
)
|
||||
nx.draw_networkx_edges(
|
||||
graph,
|
||||
pos,
|
||||
ax=ax,
|
||||
arrows=True,
|
||||
arrowstyle="-|>",
|
||||
arrowsize=18,
|
||||
edge_color=_EDGE_COLOR,
|
||||
width=1.4,
|
||||
connectionstyle="arc3,rad=0.06",
|
||||
node_size=_NODE_SIZE,
|
||||
)
|
||||
if any(lbl for lbl in edge_labels.values()):
|
||||
nx.draw_networkx_edge_labels(
|
||||
graph,
|
||||
pos,
|
||||
edge_labels=edge_labels,
|
||||
ax=ax,
|
||||
font_size=7,
|
||||
font_color=_EDGE_LABEL_COLOR,
|
||||
bbox={
|
||||
"boxstyle": "round,pad=0.2",
|
||||
"fc": "white",
|
||||
"ec": "none",
|
||||
"alpha": 0.7,
|
||||
},
|
||||
)
|
||||
|
||||
ax.set_title(title if title else "Join graph", fontsize=13)
|
||||
ax.axis("off")
|
||||
fig.tight_layout()
|
||||
return fig
|
||||
except Exception:
|
||||
# Never raise — the document render is lazy and must not be broken.
|
||||
return _text_figure("No se pudo dibujar el join graph.")
|
||||
@@ -0,0 +1,84 @@
|
||||
"""Tests para draw_join_graph_figure (rasteriza el join graph, grupo eda).
|
||||
|
||||
Usa el backend Agg sin abrir ventanas; cada test cierra la Figure construida
|
||||
(matplotlib.pyplot.close) para no acumular estado entre tests. Las aserciones de
|
||||
guardado escriben a tmp_path (fixture de pytest) y comprueban que el PNG no está
|
||||
vacío.
|
||||
"""
|
||||
|
||||
import matplotlib
|
||||
|
||||
matplotlib.use("Agg")
|
||||
|
||||
import matplotlib.pyplot as plt # noqa: E402
|
||||
from matplotlib.figure import Figure # noqa: E402
|
||||
|
||||
from draw_join_graph_figure import draw_join_graph_figure
|
||||
|
||||
|
||||
def _make_join_graph():
|
||||
"""Join graph mínimo: 3 nodos (customers/orders/products) y 2 aristas.
|
||||
|
||||
orders -> customers y orders -> products. `orders` es el hub (out_degree 2).
|
||||
"""
|
||||
return {
|
||||
"nodes": [
|
||||
{"table": "customers", "out_degree": 0, "in_degree": 1, "role": "dimension"},
|
||||
{"table": "orders", "out_degree": 2, "in_degree": 0, "role": "fact"},
|
||||
{"table": "products", "out_degree": 0, "in_degree": 1, "role": "dimension"},
|
||||
],
|
||||
"edges": [
|
||||
{
|
||||
"from_table": "orders",
|
||||
"from_col": "customer_id",
|
||||
"to_table": "customers",
|
||||
"to_col": "id",
|
||||
"cardinality": "N:1",
|
||||
"inclusion": 1.0,
|
||||
},
|
||||
{
|
||||
"from_table": "orders",
|
||||
"from_col": "product_id",
|
||||
"to_table": "products",
|
||||
"to_col": "id",
|
||||
"cardinality": "N:1",
|
||||
"inclusion": 0.98,
|
||||
},
|
||||
],
|
||||
"hubs": ["orders"],
|
||||
}
|
||||
|
||||
|
||||
def test_returns_figure_with_axis():
|
||||
fig = draw_join_graph_figure(_make_join_graph(), title="Relaciones FK")
|
||||
assert isinstance(fig, Figure)
|
||||
# Al menos un eje con el diagrama.
|
||||
assert len(fig.axes) >= 1
|
||||
plt.close(fig)
|
||||
|
||||
|
||||
def test_savefig_produces_nonempty_png(tmp_path):
|
||||
fig = draw_join_graph_figure(_make_join_graph())
|
||||
out = tmp_path / "g.png"
|
||||
fig.savefig(out)
|
||||
assert out.exists()
|
||||
assert out.stat().st_size > 0
|
||||
plt.close(fig)
|
||||
|
||||
|
||||
def test_empty_dict_does_not_raise_and_savefig_png(tmp_path):
|
||||
fig = draw_join_graph_figure({})
|
||||
assert isinstance(fig, Figure)
|
||||
out = tmp_path / "empty.png"
|
||||
fig.savefig(out)
|
||||
assert out.stat().st_size > 0
|
||||
plt.close(fig)
|
||||
|
||||
|
||||
def test_none_does_not_raise_and_savefig_png(tmp_path):
|
||||
fig = draw_join_graph_figure(None)
|
||||
assert isinstance(fig, Figure)
|
||||
out = tmp_path / "none.png"
|
||||
fig.savefig(out)
|
||||
assert out.stat().st_size > 0
|
||||
plt.close(fig)
|
||||
Reference in New Issue
Block a user